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BaseInfo

ncRNA ID novel_zma_miR1417
Species Zea mays
Class miRNA
Genome position Chr1:21151106-21151220 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR5100255;SRR2089700;SRR2089701;SRR2089703
Length 22
Mature sequence(if miRNA) 94 - CUGUGAGGAAUUUAGUAGGGUU - 115
Stem-loop(if miRNA) --       UU    A      --     GACA    AUUAUUUAU            -    
  CUCUACU  AUUC CUCGCA  AAGUU    AUCA         UUGUCAAAUAUA UGUCG
  |||||||  |||| ||||||  |||||    ||||         |||||||||||| ||||A
  GGGAUGA  UAAG GAGUGU  UUCAA    UAGU         GACGGUUUAUAU ACAGC
UU       UU    -      CC     --AG    ------CAU            U    
Stem-loop sequence CUCUACUUUAUUCACUCGCAAAGUUGACAAUCAAUUAUUUAUUUGUCAAAUAUAUGUCGACGACAUUAUAUUUGGCAGUACUGAUGAAACUUCCUGUGAGGAAUUUAGUAGGGUU