| ncRNA ID | osa-miR393b-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:34931876-34932007 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 85 - UCCAAAGGGAUCGCAUUGAUCU - 106 |
| Stem-loop(if miRNA) |
UCGGCCUG - GAAACUAGUGGAGGACUCCAAAGGGAUCGCAUUGAUCUGGCUAGCUAUCUCGAUCGA A G U | | C C C G ------UU U CUUUUAAGGUUUCCCUAACGUGACUAGCUAGUGCGUGCAGCAGCAGCUAGCUACUCC |
| Stem-loop sequence | UCGGCCUGAGGAAACUAGUGGAGGACUCCAAAGGGAUCGCAUUGAUCUGGCUAGCUAUCUCGAUCGAUCGCCUCAUCGAUCGACGACGACGUGCGUGAUCGAUCAGUGCAAUCCCUUUGGAAUUUUCCUCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK060126.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:006-308-H11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| CT834644.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI006O22, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK066367.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013063P07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015773313.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333246 (LOC4333246), mRNA | uncharacterized LOC4333246(LOC4333246) | coding protein | psRNATarget |
| 1 | PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis"; Sunkar R, Zhu JK; Plant Cell. 16:2001-2019(2004). |
| 2 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |