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BaseInfo

ncRNA ID novel_zma_miR1405
Species Zea mays
Class miRNA
Genome position Chr2:66126268-66126327 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 37 - UGUUUAGCACUCGGUAGAGGGGCU - 60
Stem-loop(if miRNA) --   UUA             --        U
  UGU   GCACUCGGUAGAG  GGGCUCUU G
  |||   |||||||||||||  ||||||||
  ACG   CGUGAGCCAUUUC  UCCGAGAG C
UC   --G             GA        C
Stem-loop sequence UGUUUAGCACUCGGUAGAGGGGCUCUUUGCCGAGAGCCUAGCUUUACCGAGUGCGGCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084785.2
ncRNA:24   UCGGGGAGAUGGCUCACGAUUUGU   1
  |***=||=||||||||||*|||||
targets:77   AAAAUCUUUACCGAGUGCCAAACA   100

2.5 Zea mays full-length cDNA clone ZM_BFb0180O09 mRNA, complete cds NA coding protein psRNATarget