ncRNA ID | novel_zma_miR1397 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:53479232-53479335 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089713;SRR2089714;SRR2287031;SRR2287162;SRR2287165;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAGGAUGUUUCCACUGACGGUU - 24 |
Stem-loop(if miRNA) |
--                  A         UAAGA   C            U   AAUAGGAUGUUUCCACUG CGGUUGUGU     UAA CGCCAGUGGAAA C   |||||||||||||||||| |||||||||     ||| ||||||||||||   UUAUCCUACAAAGGUGAC GCCAACACA     GUU GCGGUCACUUUU A CU                  C         UUGUG   A            A |
Stem-loop sequence | AAUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGAUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ101180.1 |
|
2.5 | TSA: Zea mays contig36836, mRNA sequence | NA | coding protein | psRNATarget |