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BaseInfo

ncRNA ID	novel_zma_miR1380
Species	Zea mays
Class	miRNA
Genome position	Chr9:24921344-24921399 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089712;SRR2089713;SRR2089707
Length	24
Mature sequence(if miRNA)	1 - UCUGAUAUCUGUAUUAUGAGGGGG - 24
Stem-loop(if miRNA)	--   G      G   U        GUG   UCU AUAUCU UAU AUGAGGGG   U   ||| |||||| ||| ||||||||   A   AGA UGUAGA AUA UAUUCCUU   C CC   G      G   -        GUA
Stem-loop sequence	UCUGAUAUCUGUAUUAUGAGGGGGUGUACAUGUUCCUUAUAUAGAGAUGUGAGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT066231.1	ncRNA:24   GGGGGAGUAUUAUGUCUAUAGUCU   1   |||||||||||||||||*|||||| targets:857   CCCCCUCAUAAUACAGAGAUCAGA   880 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0110N21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001346555.1	ncRNA:24   GGGGGAGUAUUAUGUCUAUAGUCU   1   |||||||||||||||||*|||||| targets:2049   CCCCCUCAUAAUACAGAGAUCAGA   2072 Target Full Sequence	1.5	Zea mays pectinesterase (LOC103637955), mRNA	NA	coding protein	psRNATarget
XM_008681307.2	ncRNA:24   GGGGGAGUAUUAUGUCUAUAGUCU   1   ||*|*||||||||||||*|||||| targets:3650   CCACGUCAUAAUACAGAGAUCAGA   3673 Target Full Sequence	1.5	PREDICTED: Zea mays calcium-transporting ATPase 1, plasma membrane-type (LOC103654477), mRNA	NA	coding protein	psRNATarget
EZ063402.1	ncRNA:24   GGGGGAGUAUUAUGUCUAUAGUCU   1   |*||*|*|||||||||||||*||| targets:153   CACCAUAAUAAUACAGAUAUAAGA   176 Target Full Sequence	2.5	TSA: Zea mays contig64524, mRNA sequence	NA	coding protein	psRNATarget