ncRNA ID | novel_zma_miR1376 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:23682633-23682691 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089706 |
Length | 24 |
Mature sequence(if miRNA) | 36 - CGUUACUGUAAUGAGCCAGCUCGG - 59 |
Stem-loop(if miRNA) |
--C    C            -CU  -   CG    AGCU GGCUCGUUAUGG   CG GCU  U    |||| ||||||||||||   || |||    UCGA CCGAGUAAUGUC   GC CGG  U GGC    -            AUU  U   UA |
Stem-loop sequence | CAGCUCGGCUCGUUAUGGCUCGGCUCGUUAUGGCUCGUUACUGUAAUGAGCCAGCUCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008653257.2 |
|
2.5 | PREDICTED: Zea mays carbonic anhydrase (LOC100283312), transcript variant X4, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008653255.2 |
|
2.5 | PREDICTED: Zea mays carbonic anhydrase (LOC100283312), transcript variant X3, mRNA | NA | coding protein | psRNATarget |