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BaseInfo

ncRNA ID osa-miR395x
Species Oryza sativa
Class miRNA
Genome position Chr4:32623067-32623162 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 61 - GUGAAGUGUUUGGAGUAGCUC - 81
Stem-loop(if miRNA) A      AU     U     CU        U       -  A    AA
 UUUGGU  CGCCA GAGUU  CUUCAAAC CUUCAUA CG CACU  U
 ||||||  ||||| |||||  |||||||| ||||||| || ||||
 AAACCA  GUGGU CUCGA  GAGGUUUG GAAGUGU GU GUGA  U
C      CU     U     -U        U       U  A    AC
Stem-loop sequence AUUUGGUAUCGCCAUGAGUUCUCUUCAAACUCUUCAUACGACACUAAUUCAAGUGAUGUUGUGAAGUGUUUGGAGUAGCUCUUGGUGUCACCAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK067071.1
ncRNA:21   CUCGAUGAGGUUUGUGAAGUG   1
  ***||||||||||*|||||||
targets:34   CCCCUACUCCAAAAACUUCAC   54

2.5 Oryza sativa Japonica Group cDNA clone:J013091I09, full insert sequence NA coding protein psRNATarget
XM_015755214.1
ncRNA:21   CUCGAUGAGGUUUGUGAAGUG   1
  ***||||||||||*|||||||
targets:79   CCCCUACUCCAAAAACUUCAC   99

2.5 PREDICTED: Oryza sativa Japonica Group rhodanese-like domain-containing protein 9, chloroplastic (LOC4346604), mRNA rhodanese-like domain-containing protein 9, chloroplastic(LOC4346604) coding protein psRNATarget

Reference

1 PMID:19951405
"Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins";
Merchan F, Boualem A, Crespi M, Frugier F;
Genome Biol. 10:R136(2009).