ncRNA ID | novel_zma_miR1346 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:136433884-136433937 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AACUUCCUACGGCUUACUGUAUCC - 54 |
Stem-loop(if miRNA) |
--U   U    C  C           C    UAC GUAG CC UAGGAAGUUAG U    ||| |||| || |||||||||||    AUG CAUU GG AUCCUUCAAUC G CCU   U    C  C           G |
Stem-loop sequence | UUACUGUAGCCCCUAGGAAGUUAGCUGGCUAACUUCCUACGGCUUACUGUAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020543465.1 |
|
2.5 | PREDICTED: Zea mays phosphopantothenoylcysteine decarboxylase (LOC100192815), transcript variant X6, mRNA | NA | coding protein | psRNATarget | |||||||||
EU949881.1 |
|
3.0 | Zea mays clone 450754 mRNA sequence | NA | coding protein | psRNATarget |