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BaseInfo

ncRNA ID	novel_zma_miR1342
Species	Zea mays
Class	miRNA
Genome position	Chr1:193341762-193341860 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089711;SRR2089712
Length	24
Mature sequence(if miRNA)	1 - CGCAGCGGGCUGGACUGGUGGCGG - 24
Stem-loop(if miRNA)	--   AG       -G   G     -G  UG G  GAG   G ---A   G GG   CGC  CGGGCUG  ACU GUGGC  GC  G CG   CUG G    GUG C  C   |||  |||||||  ||| |||||  ||  | ||   ||| |    ||| |   GCG  GUCCGGC  UGG CACUG  CG  C GC   GGC C    CAC G  U GG   --       GG   G     GG  GU G  --A   A GGGA   G GG
Stem-loop sequence	CGCAGCGGGCUGGACUGGUGGCGGCUGGGCGGAGCUGGGAGUGGCGGCUGGGGCACAGGGCACGGACGGCUGGCGGGUCACGGGUGGCGGCCUGGCGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008650615.2	ncRNA:24   GGCGGUGGUCAGGUCGGGCGACGC   1   ||*=|*||||||||||*||||||| targets:26   CCUUCUCCAGUCCAGCGCGCUGCG   49 Target Full Sequence	2.5	PREDICTED: Zea mays transcription elongation factor 1 homolog (LOC103629520), mRNA	NA	coding protein	psRNATarget
BT066417.1	ncRNA:24   GGCGGUGGUCAGGUCGGGCGACGC   1   =|*||||*||||||||||||*||| targets:1801   UCUCCACGAGUCCAGCCCGCGGCG   1824 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0155P12 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175824.1	ncRNA:24   GGCGGUGGUCAGGUCGGGCGACGC   1   =|*||||*||||||||||||*||| targets:1801   UCUCCACGAGUCCAGCCCGCGGCG   1824 Target Full Sequence	2.5	Zea mays putative leucine-rich repat protein kinase family protein (LOC100383159), mRNA	NA	coding protein	psRNATarget