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BaseInfo

ncRNA ID	novel_zma_miR1328
Species	Zea mays
Class	miRNA
Genome position	Chr8:25444-25645 [-]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089711;SRR2089712;SRR2089714;SRR2089707
Length	24
Mature sequence(if miRNA)	1 - GUGGCCAUUGAUCGUUGACCAGAG - 24
Stem-loop(if miRNA)	-C   -                   A    C      -             U   -  AA  A                      A  CCAACUCAAUUUUC   CUG UCAAUGAUCAAUGGCCGCA AACC CCAUUU UGUCGAAAAUAGC UGA CG  CA UUUUCAAUAAUACCGAAGGCUA GA              A   ||| ||||||||||||||||||| |||| |||||| ||||||||||||| ||| ||  || |||||||||||||||||||||| ||              C   GAC AGUUGCUAGUUACCGGUGU UUGG GGUAAA ACAGCUUUUAUCG ACU GC  GU AAAAGUUAUUAUGGUUUCCGAU UG              C GA   C                   G    C      C             U   U  GG  -                      G  UAAGAACCUACAGA
Stem-loop sequence	CCUGUCAAUGAUCAAUGGCCGCAAAACCCCCAUUUUGUCGAAAAUAGCUUGACGAACAAUUUUCAAUAAUACCGAAGGCUAAGACCAACUCAAUUUUCACCAGACAUCCAAGAAUGUGUAGCCUUUGGUAUUAUUGAAAAUGGGCGUUCAUGCUAUUUUCGACACAAAUGGCGGUUGUGUGGCCAUUGAUCGUUGACCAGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235059.1	ncRNA:24   GAGACCAGUUGCUAGUUACCGGUG   1   ||||||||||=||||||||||||| targets:28   CUCUGGUCAAUGAUCAAUGGCCAC   51 Target Full Sequence	1.0	Sequence 1054 from Patent EP2985353	NA	coding protein	psRNATarget
JB163390.1	ncRNA:24   GAGACCAGUUGCUAGUUACCGGUG   1   ||||||||||=||||||||||||| targets:28   CUCUGGUCAAUGAUCAAUGGCCAC   51 Target Full Sequence	1.0	Sequence 1054 from Patent EP2559767	NA	coding protein	psRNATarget
HI402929.1	ncRNA:24   GAGACCAGUUGCUAGUUACCGGUG   1   ||||||||||=||||||||||||| targets:28   CUCUGGUCAAUGAUCAAUGGCCAC   51 Target Full Sequence	1.0	Sequence 1054 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008647324.2	ncRNA:24   GAGACCAGUUGCUAGUUACCGGUG   1   *||*|||=*|=||||||||||||| targets:775   GUCAGGUUCAUGAUCAAUGGCCAC   798 Target Full Sequence	3.0	PREDICTED: Zea mays expansin-A23 (LOC103626961), mRNA	NA	coding protein	psRNATarget