Search result

BaseInfo

ncRNA ID novel_zma_miR1321
Species Zea mays
Class miRNA
Genome position Chr8:51383591-51383808 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR2089714;SRR5451003;SRR5451004;SRR5451005;SRR5451006;SRR1583942;SRR2089700;SRR2089701;SRR2089704;SRR2089705;SRR2089707;SRR2089708
Length 22
Mature sequence(if miRNA) 197 - CCAUACGAUGGUGAGCCGGUGU - 218
Stem-loop(if miRNA) --   U                     C                               C         U   C    C               U  C  CUA     A
  CCA ACGAUGGUGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUUUAAAGC GCCCCGGCU CAU UGUG GCUUCUCUUCUCUUA GU GG   CUAAG U
  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||| || ||   |||||
  GGU UGCUACCACUCGGCCACAUGA ACAGGCUUACACACCAGUGUUUUAAAUUUCG CGGGGCCGA GUA ACAC CGAAGAGAAGAGAAU CA CC   GAUUC C
CC   C                     U                               A         C   C    A               C  C  CAC     A
Stem-loop sequence CCAUACGAUGGUGAGCCGGUGUACUCUGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCUUCAUCUGUGCGCUUCUCUUCUCUUAUGUCGGCUACUAAGAUCACUUAGCACCCCACCUAAGAGAAGAGAAGCACACACAUGCAGCCGGGGCAGCUUUAAAUUUUGUGACCACACAUUCGGACAUAGUACACCGGCUCACCAUCGUCUGGCC