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BaseInfo

ncRNA ID novel_zma_miR1320
Species Zea mays
Class miRNA
Genome position Chr8:56626178-56626249 [-]
Reference genome RefGen_v4
Source SRR2089710
Length 20
Mature sequence(if miRNA) 53 - CAACAUUGUAGGAUCCUUUU - 72
Stem-loop(if miRNA) --   C        A    UU   UU  -AUCC   A
  CAA AUUGUAGG UCCU  UAU  UC     UGU A
  ||| |||||||| ||||  |||  ||     |||
  GUU UAGCAUCC AGGA  AUG  AG     ACA G
GU   U        A    -U   UU  ACUCU   A
Stem-loop sequence CAACAUUGUAGGAUCCUUUUAUUUUCAUCCUGUAAGAACAUCUCAGAUUGUAUAGGAACCUACGAUUUUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ049423.1
ncRNA:20   UUUUCCUAGGAUGUUACAAC   1
  |||||*||*|||||||||||
targets:113   AAAAGAAUGCUACAAUGUUG   132

2.5 TSA: Zea mays contig50541, mRNA sequence NA coding protein psRNATarget