ncRNA ID | novel_zma_miR1315 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:105396488-105396568 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287031;SRR2287159;SRR2287160;SRR2287163;SRR2647391;SRR1997865;SRR2089700;SRR2089701 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUGGUGCAUUGACUUGGUCAA - 21 |
Stem-loop(if miRNA) |
-- U                        AG       A     G CCAAGUCAAUGCAUCAUUGCCCCU  UUUUGCC UCA   | ||||||||||||||||||||||||  ||||||| ||A   C GGUUCAGUUACGUGGUAACGGGGA  GAAGCGG AGA AA U                        CG       A   |
Stem-loop sequence | GUCCAAGUCAAUGCAUCAUUGCCCCUAGUUUUGCCAUCAAAGAAGGCGAAGGCAGGGGCAAUGGUGCAUUGACUUGGUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY111043.1 |
|
2.5 | Zea mays CL11409_1 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY110908.1 |
|
2.5 | Zea mays CL37059_1 mRNA sequence | NA | coding protein | psRNATarget |