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BaseInfo

ncRNA ID novel_zma_miR1313
Species Zea mays
Class miRNA
Genome position Chr8:110965624-110965672 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2089698;SRR2089699;SRR2089701;SRR2089702;SRR2089703;SRR2089706
Length 24
Mature sequence(if miRNA) 26 - GACGGGUAAACGGGGAUGGGGAAG - 49
Stem-loop(if miRNA) -- A    UA              A
  G CGGG  AACGGGGAUGGGGA G
  | ||||  |||||||||||||| C
  C GCCC  UUGCCCCUACCCCU A
GG -    -C              U
Stem-loop sequence GACGGGUAAACGGGGAUGGGGAAGCAUUCCCCAUCCCCGUUCCCCGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542351.1
ncRNA:24   GAAGGGGUAGGGGCAAAUGGGCAG   1
  |*||||||||||||||||||||||
targets:310   CAUCCCCAUCCCCGUUUACCCGUC   333

0.0 PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA NA coding protein psRNATarget