ncRNA ID | novel_zma_miR1302 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:166763243-166763432 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR5105961;SRR2089703;SRR2089706;SRR2089708 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAGAGAAGGGUUGUGUAAAA - 21 |
Stem-loop(if miRNA) |
--            G C     CUA            CA      A                               CC      AGU    AGAA  A   UUAUACAACCCU C CUCAG   AAAUAACUUACA  AGUAUU UUAGAAUUUUCUGGGGACUUUAAAUGUGGAC  UUAUAA   CUUA    AC U   |||||||||||| | |||||   ||||||||||||  |||||| |||||||||||||||||||||||||||||||  ||||||   ||||    ||   AAUGUGUUGGGA G GAGUC   UUUAUUGAAUGU  UUAUAA AAUCUUAAAAGACUCCUGAAGUUUAUACUUG  AGUAUU   GAAU    UG U AA            A A     AAA            AC      A                               --      ---    ---G  U |
Stem-loop sequence | UUAUACAACCCUGCCCUCAGCUAAAAUAACUUACACAAGUAUUAUUAGAAUUUUCUGGGGACUUUAAAUGUGGACCCUUAUAAAGUCUUAAGAAACAUUUGUGUAAGUUAUGAGUUCAUAUUUGAAGUCCUCAGAAAAUUCUAAAAAUAUUCAUGUAAGUUAUUUAAACUGAGAGAAGGGUUGUGUAAAA |