ncRNA ID | novel_zma_miR1300 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:170274421-170274500 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 24 |
Mature sequence(if miRNA) | 57 - GCAAGGAUUUAGAGUGGUUCAGGC - 80 |
Stem-loop(if miRNA) |
--G    GA       UG  U        --     CGUAA    CAAG  UUUAGAG  GU CAGGCCGC  UGGAG     U    ||||  |||||||  || ||||||||  |||||    GUUC  GAGUUUC  UA GUUUGGUG  ACCUC     A UGA    GA       GU  U        UC     UUCCC |
Stem-loop sequence | GCAAGGAUUUAGAGUGGUUCAGGCCGCUGGAGCGUAAUACCCUUCUCCACUGUGGUUUGUAUUGCUUUGAGAGCUUGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ063125.1 |
|
2.5 | TSA: Zea mays contig64247, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020545234.1 |
|
1.0 | PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA | NA | coding protein | psRNATarget |