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BaseInfo

ncRNA ID novel_zma_miR1273
Species Zea mays
Class miRNA
Genome position Chr7:82107274-82107348 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089708
Length 24
Mature sequence(if miRNA) 52 - AAAGGGCUUAUUUUCGGCGGCGUC - 75
Stem-loop(if miRNA) --              UU                   
  CGCCGCCGAAAAUA  CCCUUUGCCGCCGAAAAUAA
  ||||||||||||||  |||||||||||||||||||C
  GCGGCGGCUUUUAU  GGGAAACGGCGGCUUUUAUU
CU              UC                   
Stem-loop sequence CGCCGCCGAAAAUAUUCCCUUUGCCGCCGAAAAUAACUUAUUUUCGGCGGCAAAGGGCUUAUUUUCGGCGGCGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239334.1
ncRNA:24   CUGCGGCGGCUUUUAUUCGGGAAA   1
  *|*|||||||||||||||*|||||
targets:6   AAAGCCGCCGAAAAUAAGGCCUUU   29

1.5 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget
JB167665.1
ncRNA:24   CUGCGGCGGCUUUUAUUCGGGAAA   1
  *|*|||||||||||||||*|||||
targets:6   AAAGCCGCCGAAAAUAAGGCCUUU   29

1.5 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget
HI407204.1
ncRNA:24   CUGCGGCGGCUUUUAUUCGGGAAA   1
  *|*|||||||||||||||*|||||
targets:6   AAAGCCGCCGAAAAUAAGGCCUUU   29

1.5 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget