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BaseInfo

ncRNA ID	novel_zma_miR1262
Species	Zea mays
Class	miRNA
Genome position	Chr7:30867506-30867630 [-]
Reference genome	RefGen_v4
Source	SRR2089710
Length	24
Mature sequence(if miRNA)	1 - GAGGUCGGGCUCGGGCGAGACGAG - 24
Stem-loop(if miRNA)	--A    -                       ----------     -  ---U     CAC         A    GUUU GCUCGAGCUUGGCCUUGGGCGAG          CCGGG GG    GCGCC   UGCCUGAGG G    |||| |||||||||||||||||||||||          ||||| ||    |||||   |||||||||    CAGA CGGGCUCGGGCUGGAGCCCGUUC          GGCCU CC    UGCGG   GCGGGCUCC G GAG    G                       UUGGUAUCAG     G  UAAG     --A         C
Stem-loop sequence	AGUUUGCUCGAGCUUGGCCUUGGGCGAGCCGGGGGUGCGCCCACUGCCUGAGGAGGCCCUCGGGCGAGGCGUGAAUCCGUCCGGGACUAUGGUUCUUGCCCGAGGUCGGGCUCGGGCGAGACGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539680.1	ncRNA:24   GA-GCAGAGCGGGCUCGGGCUGGAG   1   ||-|||=||||||||||||*||||| targets:796   CUACGUUUCGCCCGAGCCCAACCUC   820 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109940245 (LOC109940245), mRNA	NA	coding protein	psRNATarget
EZ106395.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||| targets:81   AUCGCCCUGCCCGAGCCCGACCUC   104 Target Full Sequence	2.0	TSA: Zea mays contig42053, mRNA sequence	NA	coding protein	psRNATarget
BT034950.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||| targets:1025   AUCGCCCUGCCCGAGCCCGACCUC   1048 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0029K05 mRNA, complete cds	NA	coding protein	psRNATarget
BT033232.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||| targets:1122   AUCGCCCUGCCCGAGCCCGACCUC   1145 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0070M21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001136636.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||| targets:1122   AUCGCCCUGCCCGAGCCCGACCUC   1145 Target Full Sequence	2.0	Zea mays glycerophosphodiester phosphodiesterase (LOC100191201), mRNA	NA	coding protein	psRNATarget
AY105906.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||| targets:1131   AUCGCCCUGCCCGAGCCCGACCUC   1154 Target Full Sequence	2.0	Zea mays PCO103687 mRNA sequence	NA	coding protein	psRNATarget
BT063813.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||| targets:1103   AUCGCCCUGCCCGAGCCCGACCUC   1126 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0109M24 mRNA, complete cds	NA	coding protein	psRNATarget
EZ063184.1	ncRNA:24   GAGCAGAGCGGGCUCGGGCUGGAG   1   *|||*|*=|||||||||||||||* targets:81   AUCGCCCUGCCCGAGCCCGACCUG   104 Target Full Sequence	3.0	TSA: Zea mays contig64306, mRNA sequence	NA	coding protein	psRNATarget