| ncRNA ID | osa-miR395d |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:31805055-31805142 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - GUGAAGUGUUUGGGGGAACUC - 31 |
| Stem-loop(if miRNA) |
AU U U ---- CUA GU UGUCG GAGUUCCCU CAAGCACUUCACGU GGCA U || ||||| ||||||||| |||||||||||||| |||| C CA AUAGC CUCAAGGGG GUUUGUGAAGUGUA CCGU U CU U - UCAU AAC |
| Stem-loop sequence | GUAUUGUCGUGAGUUCCCUUCAAGCACUUCACGUGGCACUAUCUCAAUGCCUACUAUGUGAAGUGUUUGGGGGAACUCUCGAUAUCAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK111395.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:002-182-D04, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015775300.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331934), mRNA | low affinity sulfate transporter 3(LOC4331934) | coding protein | psRNATarget | |||||||||
| AK067353.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J013100L12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015775294.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331932), transcript variant X3, mRNA | low affinity sulfate transporter 3(LOC4331932) | coding protein | psRNATarget | |||||||||
| XM_015775293.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331932), transcript variant X2, mRNA | low affinity sulfate transporter 3(LOC4331932) | coding protein | psRNATarget | |||||||||
| XM_015775292.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331932), transcript variant X1, mRNA | low affinity sulfate transporter 3(LOC4331932) | coding protein | psRNATarget |
| 1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
| 2 | PMID:16117853
"Molecular evolution of the rice miR395 gene family"; Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L; Cell Res. 15:631-638(2005). |