| ncRNA ID | novel_zma_miR1253 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr7:88542332-88542550 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287161;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089708 |
| Length | 21 |
| Mature sequence(if miRNA) | 199 - AUGUUGGUUGUUUGGUAUUUA - 219 |
| Stem-loop(if miRNA) |
-- A AU U UGUC - A GC GUUUAA CAAAAUCCAC A - UC AUU AUGUUGGUUGUUUGGUAUUU ACUU UG UAU UGAAAUUAUGAUA AUUGA AUUUU UAUGUUGUUUAAAGC AAGU UCAUG GC GUU AAC U |||||||||||||||||||| |||| || ||| ||||||||||||| ||||| ||||| ||||||||||||||| |||| ||||| || ||| ||| UACAAUCAACAAACUAUAAA UGAA AC AUA ACUUUAAUACUAU UAACU UAAAA AUACAACAAAUUUUG UUCA AGUAC CG UAA UUG U AA C CU C ---- A A -A -----A ---------- - A UU CAG |
| Stem-loop sequence | AUGUUGGUUGUUUGGUAUUUAACUUAUUGUUAUUGUCUGAAAUUAUGAUAAUUGAAAUUUUGCUAUGUUGUUUAAAGCGUUUAAAAGUCAAAAUCCACUCAUGAGCGUUUCAACAUUUUGACGUUUUAAUAGCCAUGAACUUAGUUUUAAACAACAUAAAAAAUAUCAAUAUAUCAUAAUUUCAAUACCAUCAAGUCAAAUAUCAAACAACUAACAUAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020550241.1 |
|
0.0 | PREDICTED: Zea mays DNA polymerase V family (LOC103650372), transcript variant X1, mRNA | NA | coding protein | psRNATarget |