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BaseInfo

ncRNA ID	novel_zma_miR1248
Species	Zea mays
Class	miRNA
Genome position	Chr7:24468219-24468324 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089715;SRR1997865;SRR1997866;SRR2089706;SRR2089707
Length	24
Mature sequence(if miRNA)	83 - AAUCCUCUCCGAUUUUUGGACUCC - 106
Stem-loop(if miRNA)	---AG   U       AAU             C        C           A      CCA AAAAUCG   GGGAUUGGAGGGG UAAAAUCU UUUUUUAUUUA A      ||| |||||||   ||||||||||||| |||||||| |||||||||||      GGU UUUUAGC   UCCUAACCUCCUU AUUUUAGG GAGGAAUAAAU A CCUCA   -       CUC             A        U           U
Stem-loop sequence	AGCCAUAAAAUCGAAUGGGAUUGGAGGGGCUAAAAUCUCUUUUUUAUUUAAAAUUAAAUAAGGAGUGGAUUUUAAUUCCUCCAAUCCUCUCCGAUUUUUGGACUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550478.1	ncRNA:24   CCUCAGGUUUUUAGCCUCUCCUAA   1   *|||||||||||*||||||||||| targets:2090   AGAGUCCAAAAACCGGAGAGGAUU   2113 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103651221 (LOC103651221), mRNA	NA	coding protein	psRNATarget
EZ063502.1	ncRNA:24   CC--UC---AGGUUUUUAGCCUCUCCUAA   1   ||--||---|=|*|||||||||||||||* targets:75   GGCAAGCACUUCCAAAAUCGGAGAGGAUC   103 Target Full Sequence	3.0	TSA: Zea mays contig64624, mRNA sequence	NA	coding protein	psRNATarget
BT039867.1	ncRNA:24   CC--UC---AGGUUUUUAGCCUCUCCUAA   1   ||--||---|=|*|||||||||||||||* targets:1332   GGCAAGCACUUCCAAAAUCGGAGAGGAUC   1360 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0047N03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149615.2	ncRNA:24   CC--UC---AGGUUUUUAGCCUCUCCUAA   1   ||--||---|=|*|||||||||||||||* targets:1490   GGCAAGCACUUCCAAAAUCGGAGAGGAUC   1518 Target Full Sequence	3.0	Zea mays uncharacterized LOC100275561 (pco141591), mRNA	NA	coding protein	psRNATarget
EU956744.1	ncRNA:24   CC--UC---AGGUUUUUAGCCUCUCCUAA   1   ||--||---|=|*|||||||||||||||* targets:1491   GGCAAGCACUUCCAAAAUCGGAGAGGAUC   1519 Target Full Sequence	3.0	Zea mays clone 1572376 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget