ncRNA ID | novel_zma_miR1244 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:134919993-134920173 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089712;SRR2089714;SRR5451003;SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACACAGACUCUGUCGGUCACCC - 24 |
Stem-loop(if miRNA) |
--         -   G C      U        -      G  G   GAAA                C G            C    GCCU   GUGACCGAC GAG C GUGUUU UGACAAGA CAUGUG UC UGC    UUUCGGCAGCAUAACC C UUGUUCUCCAAU GCAC    A   ||||||||| ||| | |||||| |||||||| |||||| || |||    |||||||||||||||| | |||||||||||| ||||    A   CACUGGCUG CUC G CACAAA ACUGUUUU GUACAC AG ACG    AAAGCCGUCGUAUUGG G GACAAGAGGUUA CGUG    A CC         U   A A      U        C      G  G   AAUC                A A            A    GUAA |
Stem-loop sequence | GUGACCGACGAGGCCGUGUUUUUGACAAGACAUGUGGUCGUGCGAAAUUUCGGCAGCAUAACCCCGUUGUUCUCCAAUCGCACGCCUAAAAAUGGUGCAAUUGGAGAACAGAGAGGUUAUGCUGCCGAAACUAAGCAGGAGCACAUGCUUUUGUCAUAAACACAGACUCUGUCGGUCACCC |