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BaseInfo

ncRNA ID	osa-miR395f
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:31804774-31804855 [-]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	8 - GUGAAUUGUUUGGGGGAACUC - 28
Stem-loop(if miRNA)	U     C         U   U  C           ---  AU  UAUCG GGGUUCCCU CAA CA UUCACAUGGUA   CU  U  ||||| ||||||||| ||| || |||||||||||   ||  GUAGC CUCAAGGGG GUU GU AAGUGUAUCAU   GA  U U     U         -   U  U           CCG  AC
Stem-loop sequence	UUAUCGCGGGUUCCCUUCAAUCACUUCACAUGGUACUAUUUCAAGGCCUACUAUGUGAAUUGUUUGGGGGAACUCUCGAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK111395.1	ncRNA:21   CUCAAGGGGGUUUGUUAAGUG   1   |||||||||||||||*||||* targets:318   GAGUUCCCCCAAACACUUCAG   338 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-182-D04, full insert sequence	NA	coding protein	psRNATarget
XM_015775300.1	ncRNA:21   CUCAAGGGGGUUUGUUAAGUG   1   |||||||||||||||*||||* targets:322   GAGUUCCCCCAAACACUUCAG   342 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331934), mRNA	low affinity sulfate transporter 3(LOC4331934)	coding protein	psRNATarget
AK064196.1	ncRNA:21   CUCAAGGGGGUUUGUUAAGUG   1   |*|||||||||||*||||||= targets:763   GUGUUCCCCCAAAAAAUUCAU   783 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-104-D05, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:15200956 "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004).
2	PMID:16117853 "Molecular evolution of the rice miR395 gene family"; Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L; Cell Res. 15:631-638(2005).