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BaseInfo

ncRNA ID novel_zma_miR1238
Species Zea mays
Class miRNA
Genome position Chr7:179755027-179755143 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089712
Length 22
Mature sequence(if miRNA) 1 - GUUUGGGAUCAAGGGUAAUGGA - 22
Stem-loop(if miRNA) --        U    -  U       U    --    GGGC      AUC     U    A
  GUUUGGGA CAAG GG AAUGGAG GGGU  GAAG    UAGAAU   UCAUU UUUA U
  |||||||| |||| || ||||||| ||||  ||||    ||||||   ||||| ||||
  CAAACCCU GUUC CC UUAUUUC CCUA  CUUC    AUCUUA   AGUGA AAAU U
UU        C    A  -       U    AC    -AUA      GGA     U    U
Stem-loop sequence GUUUGGGAUCAAGGGUAAUGGAGUGGGUGAAGGGGCUAGAAUAUCUCAUUUUUUAAUUUUAAAUAGUGAAGGAUUCUAAUACUUCCAAUCCUCUUUAUUCCACUUGCUCCCAAACUU