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BaseInfo

ncRNA ID novel_zma_miR1231
Species Zea mays
Class miRNA
Genome position Chr7:170572149-170572291 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089712;SRR2089713
Length 21
Mature sequence(if miRNA) 123 - CAAUCUGAAUUGUUGCGGCUA - 143
Stem-loop(if miRNA) --   A           U        C   CUA     CA   A   C   CAAUCAACC         U  U A
  GCC CAACAAUUCAG UUGAAAUU AUC   GAUGC  AGA AGA AAG         UGUUACUGU CA C U
  ||| ||||||||||| |||||||| |||   |||||  ||| ||| |||         ||||||||| || |
  CGG GUUGUUAAGUC AACUUUAA UAG   CUACG  UCU UUU UUC         ACAGUGACA GU G G
AU   C           U        A   AAA     AC   A   U   ------UUC         -  C U
Stem-loop sequence GCCACAACAAUUCAGUUUGAAAUUCAUCCUAGAUGCCAAGAAAGACAAGCAAUCAACCUGUUACUGUUCAUCAUGUGCUGACAGUGACACUUCUUUUUUAUCUCAGCAUCAAAGAUAAAUUUCAAUCUGAAUUGUUGCGGCUA