ncRNA ID | novel_zma_miR1230 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:125684018-125684177 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAACUUAACUGUAAGAACGUGGGU - 24 |
Stem-loop(if miRNA) |
--         UG                A         ----------UGG  --- AAAAAUUCAACGGCCCCCGUCGAACUUA   GAACUUAAC  UAAGAACGUGGGUGCC UCGAACUUA             GA   A                            A   |||||||||  |||||||||||||||| |||||||||             ||   |                            A   CUUGAAUUG  AUUCUUGCACCCAUGG AGCUUGAAU             CC   G                            A AG         UA                C         UGUAAUUCUUGUA  CAU GCAGCUUGAAUUUAAAUUCUUGCACGCA |
Stem-loop sequence | GAACUUAACUGUAAGAACGUGGGUGCCAUCGAACUUAUGGGAAAAAAAUUCAACGGCCCCCGUCGAACUUAAAAACGCACGUUCUUAAAUUUAAGUUCGACGGUACCCAUGUUCUUAAUGUUAAGUUCGACGGUACCCACGUUCUUAAUGUUAAGUUCGA |