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BaseInfo

ncRNA ID novel_zma_miR1230
Species Zea mays
Class miRNA
Genome position Chr1:125684018-125684177 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - GAACUUAACUGUAAGAACGUGGGU - 24
Stem-loop(if miRNA) --         UG                A         ----------UGG  --- AAAAAUUCAACGGCCCCCGUCGAACUUA
  GAACUUAAC  UAAGAACGUGGGUGCC UCGAACUUA             GA   A                            A
  |||||||||  |||||||||||||||| |||||||||             ||   |                            A
  CUUGAAUUG  AUUCUUGCACCCAUGG AGCUUGAAU             CC   G                            A
AG         UA                C         UGUAAUUCUUGUA  CAU GCAGCUUGAAUUUAAAUUCUUGCACGCA
Stem-loop sequence GAACUUAACUGUAAGAACGUGGGUGCCAUCGAACUUAUGGGAAAAAAAUUCAACGGCCCCCGUCGAACUUAAAAACGCACGUUCUUAAAUUUAAGUUCGACGGUACCCAUGUUCUUAAUGUUAAGUUCGACGGUACCCACGUUCUUAAUGUUAAGUUCGA