Search result

BaseInfo

ncRNA ID	novel_zma_miR1229
Species	Zea mays
Class	miRNA
Genome position	Chr7:155317990-155318079 [+]
Reference genome	RefGen_v4
Source	SRR2089710
Length	24
Mature sequence(if miRNA)	67 - AGUGUAAUGUCUCUGGCACUCGGC - 90
Stem-loop(if miRNA)	--          U C   A                 AAG   U G   CGAGUGUCAG G CAU ACACUCGGCAAAGAACC   ACC G G   |||||||||| | ||| |||||||||||||||||   ||| |   GCUCACGGUC C GUA UGUGAGCCGUUUCUUGG   UGG C C CG          U U   A                 AUA   C A
Stem-loop sequence	CGAGUGUCAGUGCCAUAACACUCGGCAAAGAACCAAGACCUGGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406639.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239157.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
JB167488.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget
HI407027.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget