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BaseInfo

ncRNA ID novel_zma_miR1217
Species Zea mays
Class miRNA
Genome position Chr1:115104353-115104433 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089715;SRR5451004;SRR2089698;SRR2089699;SRR2089706
Length 24
Mature sequence(if miRNA) 58 - ACCUAGAACACUCGGCAAAGUCGU - 81
Stem-loop(if miRNA) --UU             A          A   A      U
    CUUUGCCGAGUGU UUAGGUGACA UCG CAAAGG A
    ||||||||||||| |||||||||| ||| |||||| A
    GAAACGGCUCACA GAUCCACUGU AGC GUUUCU U
UGCU             A          G   C      U
Stem-loop sequence UUCUUUGCCGAGUGUAUUAGGUGACAAUCGACAAAGGUAAUUUCUUUGCCGAGUGUCACCUAGAACACUCGGCAAAGUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   UGCUGAAA-CGGCUCACAAGAUCCA   1
  ==||||||-||||||||||||||||
targets:527   GUGACUUUUGCCGAGUGUUCUAGGU   551

2.0 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget