ncRNA ID | novel_zma_miR1210 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:5430374-5430446 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 24 |
Mature sequence(if miRNA) | 50 - AGAAAUCUAUGAUUUGUAGUGGCG - 73 |
Stem-loop(if miRNA) |
--      G        --      G        CCU   CCACUA AAAUCGUA  UUUCUA UGGCGGUU   U   |||||| ||||||||  |||||| ||||||||   A   GGUGAU UUUAGUAU  AAAGAU ACCGCCAA   A GC      G        CU      G        AAG |
Stem-loop sequence | CCACUAGAAAUCGUAUUUCUAGUGGCGGUUCCUUAAGAAAACCGCCAGUAGAAAUCUAUGAUUUGUAGUGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ235184.1 |
|
3.0 | Sequence 1179 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI403054.1 |
|
3.0 | Sequence 1179 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB163515.1 |
|
3.0 | Sequence 1179 from Patent EP2559767 | NA | coding protein | psRNATarget |