ncRNA ID | novel_zma_miR1200 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:217863231-217863313 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR1583942 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCUAGAUGCAUGCUUAAUGGCC - 22 |
Stem-loop(if miRNA) |
--  U     G     -      -    AA    ACUUAG   AU   CU UUAAG GUGUA CUAGAC GGCA  CUUU      UUG  U   || ||||| ||||| |||||| ||||  ||||      |||   GG AAUUC UACGU GAUCUG CCGU  GAAG      AAC  U CC  U     G     A      G    -A    ----AA   GU |
Stem-loop sequence | CUUUUAAGGGUGUACUAGACGGCAAACUUUACUUAGUUGAUUUUGCAAAAGAAGAUGCCGGUCUAGAUGCAUGCUUAAUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
X98279.1 |
|
3.0 | Z.mays high copy dispersed repeat DNA, ZHCR4 | NA | coding protein | psRNATarget |