ncRNA ID | novel_zma_miR1199 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:74609157-74609248 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089714;SRR5451005 |
Length | 24 |
Mature sequence(if miRNA) | 69 - CUAAAACCAUAGGGAUUGAGGGGG - 92 |
Stem-loop(if miRNA) |
-CUAAAA            A           AGGGA   GA   GAU        CCAUAGGGAUUG GGGGGAUUGGA     UUG  GAG   U        |||||||||||| |||||||||||     |||  |||        GGUAUCCCUAAC CCCCCUAAUUU     GAU  UUC   U ACGGUUA            -           -AGGG   -G   AGU |
Stem-loop sequence | CUAAAACCAUAGGGAUUGAGGGGGAUUGGAAGGGAUUGGAGAGGAUUUUGACUUGUAGGGGAUUUAAUCCCCCCAAUCCCUAUGGAUUGGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ083462.1 |
|
1.5 | TSA: Zea mays contig19106, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT087370.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0056A06 mRNA, complete cds | NA | coding protein | psRNATarget |