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BaseInfo

ncRNA ID novel_zma_miR1197
Species Zea mays
Class miRNA
Genome position Chr10:118923365-118923436 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089715;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - GUGCUCCUGCACCAGGUCGCGGAC - 24
Stem-loop(if miRNA) --      -   CAC    U       C    --    
  GUGCUC CUG   CAGG CGCGGAC GUCC  GGCCC
  |||||| |||   |||| ||||||| ||||  ||||C
  CACGAG GAC   GUCC GCGCCUG CAGG  CCGGU
GC      A   -CA    -       C    CG    
Stem-loop sequence GUGCUCCUGCACCAGGUCGCGGACCGUCCGGCCCCUGGCCGCGGACCGUCCGCGCCUGACCAGAGAGCACCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU968855.1
ncRNA:24   CAGGCGCUGGACCACGUCCUCGUG   1
  ||||||||||||||||||||||*|
targets:730   GUCCGCGACCUGGUGCAGGAGCUC   753

1.5 Zea mays clone 324570 mRNA sequence NA coding protein psRNATarget