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BaseInfo

ncRNA ID	novel_zma_miR1195
Species	Zea mays
Class	miRNA
Genome position	Chr10:18158332-18158443 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	23
Mature sequence(if miRNA)	1 - UGGUUUGAUGGCUAACUUGCCAC - 23
Stem-loop(if miRNA)	--       A       -CU          UUCCUAACUUUUG               C   A   UGGUUUG UGGCUAA   UGCCACACUU             UGCCUAAGGUUAGUU UUC A   ||||||| |||||||   ||||||||||             ||||||||||||||| ||| U   ACCAAGC ACCGAUU   ACGGUGUGAA             ACGGAUUCCAAUCAG AAG U AA       -       UAC          -------------               C   C
Stem-loop sequence	UGGUUUGAUGGCUAACUUGCCACACUUUUCCUAACUUUUGUGCCUAAGGUUAGUUCUUCAAUUCGAACGACUAACCUUAGGCAAAGUGUGGCACAUUUAGCCACGAACCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681615.2	ncRNA:23   CACCGUUCAAUCGGUAGUUUGGU   1   ||||||||||||=|||||||||| targets:1770   GUGGCAAGUUAGUCAUCAAACCA   1792 Target Full Sequence	1.5	PREDICTED: Zea mays cytokinin dehydrogenase 7 (LOC103654801), mRNA	NA	coding protein	psRNATarget
XM_020541969.1	ncRNA:23   CACCGUUCAAUCGGUAGUUUGGU   1   ||||||||||||=|||||||||| targets:1248   GUGGCAAGUUAGUCAUCAAACCA   1270 Target Full Sequence	1.5	PREDICTED: Zea mays RING/U-box superfamily protein (AY109699), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT037664.1	ncRNA:23   CACCGUUCAAUCGGUAGUUUGGU   1   ||||||||||||*|||||||||| targets:1325   GUGGCAAGUUAGACAUCAAACCA   1347 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0186J07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154039.2	ncRNA:23   CACCGUUCAAUCGGUAGUUUGGU   1   ||||||||||||*|||||||||| targets:2072   GUGGCAAGUUAGACAUCAAACCA   2094 Target Full Sequence	1.5	Zea mays Na+/H+ antiporter, probable CP0838 (IDP767), mRNA	NA	coding protein	psRNATarget
EU955653.1	ncRNA:23   CACCGUUCAAUCGGUAGUUUGGU   1   ||||||||||||*|||||||||| targets:2073   GUGGCAAGUUAGACAUCAAACCA   2095 Target Full Sequence	1.5	Zea mays clone 1541098 Na+/H+ antiporter, probable CP0838 mRNA, complete cds	NA	coding protein	psRNATarget
EZ091125.1	ncRNA:23   CAC--CGUUCAAUCGGUAGUUUGGU   1   |||--|=|||||||=|||||||||| targets:48   GUGUAGUAAGUUAGUCAUCAAACCA   72 Target Full Sequence	2.5	TSA: Zea mays contig26772, mRNA sequence	NA	coding protein	psRNATarget