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BaseInfo

ncRNA ID osa-miR5803
Species Oryza sativa
Class miRNA
Genome position Chr4:30231534-30231620 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - ACCACUGUAGACGCUACGUGUGAG - 34
Stem-loop(if miRNA) -           C  C     A    ---     U AG   AUA
 UAAUGUUACUA CA UGUAG CGCU   ACGUG G  AUA   G
 ||||||||||| || ||||| ||||   ||||| |  |||   G
 AUUACAGUGAU GU AUGUC GCGA   UGCAC C  UAU   A
U           A  A     C    CUA     C AA   AGG
Stem-loop sequence UAAUGUUACUACCACUGUAGACGCUACGUGUGAGAUAAUAGGAGGAUAUAACCCACGUAUCAGCGCCUGUAAUGAUAGUGACAUUAU

Reference

1 PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage";
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ;
Plant Cell. 23:4185-4207(2011).