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BaseInfo

ncRNA ID novel_zma_miR1168
Species Zea mays
Class miRNA
Genome position Chr6:127532717-127532808 [+]
Reference genome RefGen_v4
Source SRR2089710
Length 24
Mature sequence(if miRNA) 1 - AAACCGAAGGGGAUUGUAGGGGCU - 24
Stem-loop(if miRNA) ---    C  A        U               C          A
   AAAC GA GGGGAUUG AGGGGCUAAAUUCUC UUCUUAUUCA U
   |||| || |||||||| ||||||||||||||| ||||||||||
   UUUG CU CCCCUAAC UCCCCGAUUUAAGGG AAGAAUAAGU U
GUU    U  -        C               U          U
Stem-loop sequence AAACCGAAGGGGAUUGUAGGGGCUAAAUUCUCCUUCUUAUUCAAUUUUGAAUAAGAAUGGGAAUUUAGCCCCUCCAAUCCCCUCUGUUUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654495.2
ncRNA:24   UCGGGGAUGUUAGGGGAAGCCAAA   1
  |||||||*|||||||||*||||||
targets:1114   AGCCCCUUCAAUCCCCUCCGGUUU   1137

2.5 PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA NA coding protein psRNATarget