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BaseInfo

ncRNA ID	novel_zma_miR1150
Species	Zea mays
Class	miRNA
Genome position	Chr2:238767539-238767643 [-]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647387
Length	24
Mature sequence(if miRNA)	1 - CGUGAUCUCUGUUCACCAAAUCAG - 24
Stem-loop(if miRNA)	--                          A                 CC  UUA   GAUUUGGUGGACAGGGAUCACGAGGG AUUCAUAGGUGAGGAAU  UC   G   |||||||||||||||||||||||||| |||||||||||||||||  ||   CUAAACCACUUGUCUCUAGUGCUCCC UAGGUAUCCACUCUUUA  AG   C GA                          C                 -C  UAA
Stem-loop sequence	GAUUUGGUGGACAGGGAUCACGAGGGAAUUCAUAGGUGAGGAAUCCUCUUAGCAAUGACAUUUCUCACCUAUGGAUCCCCUCGUGAUCUCUGUUCACCAAAUCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ095368.1	ncRNA:24   GACUAAACCACUUGUCUCUAGUGC   1   =|||||||||||*||||||||||| targets:36   UUGAUUUGGUGAUCAGAGAUCACG   59 Target Full Sequence	1.5	TSA: Zea mays contig31021, mRNA sequence	NA	coding protein	psRNATarget
XM_008667073.2	ncRNA:24   GACUAAACCACUUGUCUCUAGUGC   1   =|||||||||||*||||||||||| targets:3291   UUGAUUUGGUGAUCAGAGAUCACG   3314 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008667075.2	ncRNA:24   GACUAAACCACUUGUCUCUAGUGC   1   =|||||||||||*||||||||||| targets:3307   UUGAUUUGGUGAUCAGAGAUCACG   3330 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008667074.2	ncRNA:24   GACUAAACCACUUGUCUCUAGUGC   1   =|||||||||||*||||||||||| targets:3311   UUGAUUUGGUGAUCAGAGAUCACG   3334 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X2, mRNA	NA	coding protein	psRNATarget