| ncRNA ID | osa-miR5501 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:28837880-28838245 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 336 - UCUUGUGGCUAGAAGGGUGAG - 356 |
| Stem-loop(if miRNA) |
AUC GA U CA - G UGAG UUCCCUUCCUUCUGUAGACAGAUAUGGUGCAAGGUGGAACUUUCCACAUGAUAGGGAAGGCACCGUGAGGUAGGGAAUGGUGUGCCUUCCUUCGUGCAAGAGGGAAAAGAGGGAUGUCAGAGCCAGCAUAGAUGAUUGCA UUUGCC UUAU CCUUCUG CCACAAG GAU CCA G G |||||| |||| ||||||| ||||||| ||| ||| | C AAACGG AGUG GGAAGAU GGUGUUC CUA UUG U G AUA GG - -C U G ---- AGAAACGAAUAGGGUUUACACGUAGGGAGGGAACGCGUGGGGGUAGUGUCAACUACCGAACUACGACCGUCCCUUUCGGUAUCGUCCGUGUUGGUUGGCCGUGGUUUGUUCCCCUCCUCGGACGAGGUUAGUGGGACCAG |
| Stem-loop sequence | AUCUUUGCCGAUUAUUCCUUCUGCACCACAAGGAUGCCAUGAGGUUCCCUUCCUUCUGUAGACAGAUAUGGUGCAAGGUGGAACUUUCCACAUGAUAGGGAAGGCACCGUGAGGUAGGGAAUGGUGUGCCUUCCUUCGUGCAAGAGGGAAAAGAGGGAUGUCAGAGCCAGCAUAGAUGAUUGCAGCGGACCAGGGUGAUUGGAGCAGGCUCCUCCCCUUGUUUGGUGCCGGUUGGUUGUGCCUGCUAUGGCUUUCCCUGCCAGCAUCAAGCCAUCAACUGUGAUGGGGGUGCGCAAGGGAGGGAUGCACAUUUGGGAUAAGCAAAGAUGUUGAUCUCUUGUGGCUAGAAGGGUGAGGGGCAAAAUA |
| 1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |