ncRNA ID | ath-miRf10019-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - GUCGCUGCUUUUGGUCGCUGAA - NA |
Stem-loop(if miRNA) |
        -                      -      C     --CC      CGUA GUCGCUGG UUCAGCGAUCAAAAGUAGCGAC AGUCGC AGGGA    AGCGAC    A |||||||| |||||||||||||||||||||| |||||| |||||    ||||||    U CAGCGACC AAGUCGCUGGUUUUCGUCGCUG UUAGCG UUUUU    UUGCUG    U         U                      A      A     AAAA      UUUU |
Stem-loop sequence | GUCGCUGGUUCAGCGAUCAAAAGUAGCGACAGUCGCCAGGGACCAGCGACCGUAAUUUUUUGUCGUUAAAAUUUUUAGCGAUUAGUCGCUGCUUUUGGUCGCUGAAUCCAGCGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY088617.1 |
|
2.5 | Arabidopsis thaliana clone 8441 mRNA, complete sequence | NA | coding protein | psRNATarget | |||||||||
NM_127408.2 |
|
2.5 | Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein mRNA | Tetratricopeptide repeat (TPR)-like superfamily protein(AT2G18520) | coding protein | psRNATarget |