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BaseInfo

ncRNA ID novel_zma_miR1118
Species Zea mays
Class miRNA
Genome position Chr10:586360-586580 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089712;SRR2089713;SRR2287165;SRR4237221;SRR4237225;SRR5451003;SRR2089705
Length 24
Mature sequence(if miRNA) 1 - AAUAGACCCGAAUAGUAGAGAGAC - 24
Stem-loop(if miRNA) -AAUA        UA        --AC      CUUU    -CAAA     --ACA      -A    A        ---A        ----A  ACAAGUGACUAUAAAAAGAU
     GACCCGAA  GUAGAGAG    UAGUAU    UGUU     UAUAU     AUGAAU  AUUA UUGGAAGU    GUAUUAUU     CA                    A
     ||||||||  ||||||||    ||||||    ||||     |||||     ||||||  |||| ||||||||    ||||||||     ||                    G
     UUGGGUUU  UAUUUUUC    AUUAUA    ACAA     AUAUA     UACUUG  UAAU GAUUUUUA    UAUAGUAG     CU                    U
GCUUA        UA        GAGA      CACU    UAAUA     CUAAA      AA    C        AUAC        AAUUG  AUCAUAUAUAUAGAGAUAUA
Stem-loop sequence AAUAGACCCGAAUAGUAGAGAGACUAGUAUCUUUUGUUCAAAUAUAUACAAUGAAUAAUUAAUUGGAAGUAGUAUUAUUACAACAAGUGACUAUAAAAAGAUAGUAUAUAGAGAUAUAUAUACUAUCGUUAAGAUGAUAUCAUAAUUUUUAGCUAAUAAGUUCAUAAAUCAUAUAAUAAUAACAUCACAUAUUAAGAGCUUUUUAUAUUUUGGGUUAUUCG