ncRNA ID | novel_zma_miR1118 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:586360-586580 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089712;SRR2089713;SRR2287165;SRR4237221;SRR4237225;SRR5451003;SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAGACCCGAAUAGUAGAGAGAC - 24 |
Stem-loop(if miRNA) |
-AAUA        UA        --AC      CUUU    -CAAA     --ACA      -A    A        ---A        ----A  ACAAGUGACUAUAAAAAGAU      GACCCGAA  GUAGAGAG    UAGUAU    UGUU     UAUAU     AUGAAU  AUUA UUGGAAGU    GUAUUAUU     CA                    A      ||||||||  ||||||||    ||||||    ||||     |||||     ||||||  |||| ||||||||    ||||||||     ||                    G      UUGGGUUU  UAUUUUUC    AUUAUA    ACAA     AUAUA     UACUUG  UAAU GAUUUUUA    UAUAGUAG     CU                    U GCUUA        UA        GAGA      CACU    UAAUA     CUAAA      AA    C        AUAC        AAUUG  AUCAUAUAUAUAGAGAUAUA |
Stem-loop sequence | AAUAGACCCGAAUAGUAGAGAGACUAGUAUCUUUUGUUCAAAUAUAUACAAUGAAUAAUUAAUUGGAAGUAGUAUUAUUACAACAAGUGACUAUAAAAAGAUAGUAUAUAGAGAUAUAUAUACUAUCGUUAAGAUGAUAUCAUAAUUUUUAGCUAAUAAGUUCAUAAAUCAUAUAAUAAUAACAUCACAUAUUAAGAGCUUUUUAUAUUUUGGGUUAUUCG |