ncRNA ID | novel_zma_miR1115 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:202049470-202049523 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089713;SRR2089714;SRR2089715;SRR2287159;SRR2287160;SRR2287161;SRR2287162;SRR2287163;SRR2287164;SRR1997865;SRR2089698;SRR2089699;SRR2089700;SRR2089704;SRR2089706;SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUCCACGGUCCGGACUGUCCGCGG - 24 |
Stem-loop(if miRNA) |
--  C    GUC             GU   GU CACG   CGGACUGUCCGCG  G   || ||||   |||||||||||||  G   CG GUGC   GCCUGGCAGGCGC  U GA  C    -GC             GG |
Stem-loop sequence | GUCCACGGUCCGGACUGUCCGCGGUGGUGGCGCGGACGGUCCGCGCGUGCGCAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ059430.1 |
|
2.5 | TSA: Zea mays contig60552, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU940813.1 |
|
2.5 | Zea mays clone 1145688 mRNA sequence | NA | coding protein | psRNATarget |