ncRNA ID | novel_zma_miR1107 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:15990599-15990780 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 24 |
Mature sequence(if miRNA) | 159 - AUUACAUGUUUGUGGAAUGGAUGA - 182 |
Stem-loop(if miRNA) |
--      GA  UG        UGGACGUG    G   UUA      U       -   AUG    --------C    CUACAUUGUAUAUUUAAUAU   AUCUGU  UA  GACAUGUG        UCAU CGC   AAUAUU GCAUUAU UGC   GCUA         AUAC                    U   ||||||  ||  ||||||||        |||| |||   |||||| ||||||| |||   ||||         ||||   UAGGUA  GU  UUGUACAU        AGUA GCG   UUGUGA UGUAGUA ACG   CGAU         AAUU                    U AG      AG  GU        ---UAUAA    -   -UG      U       U   --A    CUUUAUUUC    GUUUUGGUAUUGGUUAUUAG |
Stem-loop sequence | AUCUGUGAUAUGGACAUGUGUGGACGUGUCAUGCGCUUAAAUAUUUGCAUUAUUGCAUGGCUACAUACCUACAUUGUAUAUUUAAUAUUUGAUUAUUGGUUAUGGUUUUGUUAACUUUAUUUCUAGCAGCAUAUGAUGUUAGUGUUGUGCGAUGAAAUAUUACAUGUUUGUGGAAUGGAUGA |