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BaseInfo

ncRNA ID novel_zma_miR1107
Species Zea mays
Class miRNA
Genome position Chr5:15990599-15990780 [+]
Reference genome RefGen_v4
Source SRR2089710
Length 24
Mature sequence(if miRNA) 159 - AUUACAUGUUUGUGGAAUGGAUGA - 182
Stem-loop(if miRNA) --      GA  UG        UGGACGUG    G   UUA      U       -   AUG    --------C    CUACAUUGUAUAUUUAAUAU
  AUCUGU  UA  GACAUGUG        UCAU CGC   AAUAUU GCAUUAU UGC   GCUA         AUAC                    U
  ||||||  ||  ||||||||        |||| |||   |||||| ||||||| |||   ||||         ||||
  UAGGUA  GU  UUGUACAU        AGUA GCG   UUGUGA UGUAGUA ACG   CGAU         AAUU                    U
AG      AG  GU        ---UAUAA    -   -UG      U       U   --A    CUUUAUUUC    GUUUUGGUAUUGGUUAUUAG
Stem-loop sequence AUCUGUGAUAUGGACAUGUGUGGACGUGUCAUGCGCUUAAAUAUUUGCAUUAUUGCAUGGCUACAUACCUACAUUGUAUAUUUAAUAUUUGAUUAUUGGUUAUGGUUUUGUUAACUUUAUUUCUAGCAGCAUAUGAUGUUAGUGUUGUGCGAUGAAAUAUUACAUGUUUGUGGAAUGGAUGA