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BaseInfo

ncRNA ID	novel_zma_miR1101
Species	Zea mays
Class	miRNA
Genome position	Chr5:146024369-146024430 [+]
Reference genome	RefGen_v4
Source	SRR2089710
Length	23
Mature sequence(if miRNA)	1 - GGGACACGCAUAACGAGACGCUA - 23
Stem-loop(if miRNA)	--   A   ---             C  CA  U   GGG CAC   GCAUAACGAGACG UA  GU U   ||| |||   ||||||||||||| ||  || C   CCC GUG   CGUGUUGUUUUGC AU  CA C CU   -   UUA             A  -C  U
Stem-loop sequence	GGGACACGCAUAACGAGACGCUACAGUUUCCUACCUAACGUUUUGUUGUGCAUUGUGCCCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008669766.2	ncRNA:23   AUCGCAGAGCAAUACGCACAGGG   1   ||||*||||||||||||||||*| targets:3084   UAGCUUCUCGUUAUGCGUGUCAC   3106 Target Full Sequence	2.5	PREDICTED: Zea mays Pentatricopeptide (PPR) repeat-containing protein-like (LOC100273888), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008669764.2	ncRNA:23   AUCGCAGAGCAAUACGCACAGGG   1   ||||*||||||||||||||||*| targets:3179   UAGCUUCUCGUUAUGCGUGUCAC   3201 Target Full Sequence	2.5	PREDICTED: Zea mays Pentatricopeptide (PPR) repeat-containing protein-like (LOC100273888), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008669760.2	ncRNA:23   AUCGCAGAGCAAUACGCACAGGG   1   ||||*||||||||||||||||*| targets:3493   UAGCUUCUCGUUAUGCGUGUCAC   3515 Target Full Sequence	2.5	PREDICTED: Zea mays Pentatricopeptide (PPR) repeat-containing protein-like (LOC100273888), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008669757.2	ncRNA:23   AUCGCAGAGCAAUACGCACAGGG   1   ||||*||||||||||||||||*| targets:3573   UAGCUUCUCGUUAUGCGUGUCAC   3595 Target Full Sequence	2.5	PREDICTED: Zea mays Pentatricopeptide (PPR) repeat-containing protein-like (LOC100273888), transcript variant X1, mRNA	NA	coding protein	psRNATarget