ncRNA ID | novel_zma_miR1095 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:112238134-112238201 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR1997865;SRR5451003;SRR5451004;SRR5451005;SRR5451006;SRR1997866;SRR2089701;SRR2089708 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGCUCAUGCUCCAUCGUCGGUC - 22 |
Stem-loop(if miRNA) |
---U   ---        AUC  CGGUCGCUGCAAG     GCU   CAUGCUCC   GU             A     |||   ||||||||   ||             A     UGA   GUAUGAGG   GC             C GGAC   ACC        -CA  CGAUGCAAUCAGC |
Stem-loop sequence | UGCUCAUGCUCCAUCGUCGGUCGCUGCAAGAACCGACUAACGUAGCCGACGGAGUAUGCCAAGUCAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538917.1 |
|
0.0 | PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538918.1 |
|
0.0 | PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020549270.1 |
|
2.5 | PREDICTED: Zea mays ethylene-responsive transcription factor ERF034 (LOC103648466), partial mRNA | NA | coding protein | psRNATarget |