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BaseInfo

ncRNA ID novel_zma_miR1095
Species Zea mays
Class miRNA
Genome position Chr4:112238134-112238201 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR1997865;SRR5451003;SRR5451004;SRR5451005;SRR5451006;SRR1997866;SRR2089701;SRR2089708
Length 22
Mature sequence(if miRNA) 1 - UGCUCAUGCUCCAUCGUCGGUC - 22
Stem-loop(if miRNA) ---U   ---        AUC  CGGUCGCUGCAAG
    GCU   CAUGCUCC   GU             A
    |||   ||||||||   ||             A
    UGA   GUAUGAGG   GC             C
GGAC   ACC        -CA  CGAUGCAAUCAGC
Stem-loop sequence UGCUCAUGCUCCAUCGUCGGUCGCUGCAAGAACCGACUAACGUAGCCGACGGAGUAUGCCAAGUCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538917.1
ncRNA:22   CUGGCUGCUACCUCGUACUCGU   1
  *|||||||||||||||||||||
targets:88   AACCGACGAUGGAGCAUGAGCA   109

0.0 PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020538918.1
ncRNA:22   CUGGCUGCUACCUCGUACUCGU   1
  *|||||||||||||||||||||
targets:3232   AACCGACGAUGGAGCAUGAGCA   3253

0.0 PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020549270.1
ncRNA:22   CUGGCUGCUACCUCGUACUCGU   1
  *=|||*||||||||||*|||||
targets:215   CGCCGUCGAUGGAGCACGAGCA   236

2.5 PREDICTED: Zea mays ethylene-responsive transcription factor ERF034 (LOC103648466), partial mRNA NA coding protein psRNATarget