ncRNA ID | osa-miR162b |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:24405899-24406032 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 104 - UCGAUAAGCCUCUGCAUCCAG - 124 |
Stem-loop(if miRNA) |
U      UGC    GC    U            UC    C   C     -CUGC  --C     AU  C  GGGUGA   CUGG  GCAG GGUUUAUCGAUC  UUCC UGC UUGUG     UC   GAUCG  GC C  ||||||   ||||  |||| ||||||||||||  |||| ||| |||||     ||   |||||  ||  UUCACU   GACC  CGUC CCGAAUAGCUAG  AAGG ACG AACAU     AG   UUAGU  CG G U      CUA    UA    U            CU    -   C     AUAAU  UUC     --  U |
Stem-loop sequence | UGGGUGAUGCCUGGGCGCAGUGGUUUAUCGAUCUCUUCCCUGCCUUGUGCUGCUCCGAUCGAUGCCCGUGCUGAUUCUUGAUAAUAUACAACGCAGGAAUCGAUCGAUAAGCCUCUGCAUCCAGAUCUCACUUU |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |