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BaseInfo

ncRNA ID osa-miR162b
Species Oryza sativa
Class miRNA
Genome position Chr4:24405899-24406032 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 104 - UCGAUAAGCCUCUGCAUCCAG - 124
Stem-loop(if miRNA) U      UGC    GC    U            UC    C   C     -CUGC  --C     AU  C
 GGGUGA   CUGG  GCAG GGUUUAUCGAUC  UUCC UGC UUGUG     UC   GAUCG  GC C
 ||||||   ||||  |||| ||||||||||||  |||| ||| |||||     ||   |||||  ||
 UUCACU   GACC  CGUC CCGAAUAGCUAG  AAGG ACG AACAU     AG   UUAGU  CG G
U      CUA    UA    U            CU    -   C     AUAAU  UUC     --  U
Stem-loop sequence UGGGUGAUGCCUGGGCGCAGUGGUUUAUCGAUCUCUUCCCUGCCUUGUGCUGCUCCGAUCGAUGCCCGUGCUGAUUCUUGAUAAUAUACAACGCAGGAAUCGAUCGAUAAGCCUCUGCAUCCAGAUCUCACUUU

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).