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BaseInfo

ncRNA ID novel_zma_miR1083
Species Zea mays
Class miRNA
Genome position Chr2:211663679-211663733 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2647387
Length 24
Mature sequence(if miRNA) 32 - AUUCUACUCCCAAAUUCAGGACGU - 55
Stem-loop(if miRNA) ---G  C        U   -    AAGAA
    CC GAAUUUGG GAG AGAA     G
    || |||||||| ||| ||||
    GG CUUAAACC CUC UCUU     A
UGCA  A        -   A    AAAAA
Stem-loop sequence GCCCGAAUUUGGUGAGAGAAAAGAAGAAAAAAUUCUACUCCCAAAUUCAGGACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654188.2
ncRNA:24   UGCAGGACUUAAACCCUCAUCUUA   1
  |||*||||||||||||=|||||||
targets:1168   ACGCCCUGAAUUUGGGGGUAGAAU   1191

1.5 PREDICTED: Zea mays uncharacterized LOC103632369 (LOC103632369), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008654189.2
ncRNA:24   UGCAGGACUUAAACCCUCAUCUUA   1
  |||*||||||||||||=|||||||
targets:1388   ACGCCCUGAAUUUGGGGGUAGAAU   1411

1.5 PREDICTED: Zea mays uncharacterized LOC103632369 (LOC103632369), transcript variant X2, mRNA NA coding protein psRNATarget