ncRNA ID | novel_zma_miR1080 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:36530330-36530390 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089712;SRR2089714;SRR2089715;SRR2287162;SRR2089700;SRR2089706;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUAUUUUGGAAUGAGUGGAUGAC - 24 |
Stem-loop(if miRNA) |
--     G   G         A    GUCGC   CGUCC AUU AUUUCGAGG AUGG     G   ||||| ||| ||||||||| ||||   GUAGG UGA UAAGGUUUU UGUC     G CA     -   G         A    AAAUU |
Stem-loop sequence | CGUCCGAUUGAUUUCGAGGAAUGGGUCGCGGUUAAACUGUAUUUUGGAAUGAGUGGAUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020550362.1 |
|
1.5 | PREDICTED: Zea mays protein ALP1-like (LOC103650735), mRNA | NA | coding protein | psRNATarget |