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BaseInfo

ncRNA ID novel_zma_miR1079
Species Zea mays
Class miRNA
Genome position Chr4:37998780-37998886 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089707
Length 25
Mature sequence(if miRNA) 83 - AAAUAGGAUAUUUUCACUGGCGGUU - 107
Stem-loop(if miRNA) --                                        C          
  AAAUAGGAUAUUUUCACUGGCGGUUGGUGUAACAGAACCG CAGUGAAAAUC
  |||||||||||||||||||||||||||||||||||||||| ||||||||||U
  UUUAUCCUAUAAAGGUGACCGCCAACCACAUUGUCUUGGC GUCACUUUUAA
CC                                        A          
Stem-loop sequence AAAUAGGAUAUUUUCACUGGCGGUUGGUGUAACAGAACCGCCAGUGAAAAUCUAAUUUUCACUGACGGUUCUGUUACACCAACCGCCAGUGGAAAUAUCCUAUUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:25   UUGGCGGUCACUUUUAUAGGAUAAA   1
  |||||||||||=|||||||||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAUUU   105

1.0 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget