ncRNA ID | novel_zma_miR1077 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:56511832-56511893 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089712;SRR1997865;SRR2089698;SRR2089704;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGGCCGUGGCUUGUGGUAGAUCGG - 24 |
Stem-loop(if miRNA) |
--   -       C  -   C     C    GG   GAU UGCCACA GC GCG GCCGC GGCC  G   ||| ||||||| || ||| ||||| ||||   CUA AUGGUGU CG UGC CGGUG CCGG  C GG   G       U  G   -     -    GC |
Stem-loop sequence | GAUUGCCACACGCGCGCGCCGCCGGCCGGGCCGGGCCGUGGCCGUGGCUUGUGGUAGAUCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT067810.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0166D05 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020551420.1 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC100276194 (LOC100276194), transcript variant X1, mRNA | NA | coding protein | psRNATarget |