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BaseInfo

ncRNA ID	novel_zma_miR1076
Species	Zea mays
Class	miRNA
Genome position	Chr2:207189608-207189721 [+]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2638137;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647388;SRR2647389;SRR2647390;SRR2647391;SRR2647467;SRR1583941;SRR1583942;SRR1583943
Length	22
Mature sequence(if miRNA)	1 - UGAUCUGGAUAUGAAUCGGUUC - 22
Stem-loop(if miRNA)	--           U       UUCAAAGAU  CAG     -CUGUC      UG  CU CCU   UGAUCUGGAUA GAAUCGG         GC   UCUUC      AGCCGU  AG  C   U   ||||||||||| |||||||         ||   |||||      ||||||  ||  |   AUUAGGCUUAU UUUAGCU         CG   AGAAG      UCGGCG  UC  G   C CG           -       --------U  AUA     CCUACC      GU  AU UUU
Stem-loop sequence	UGAUCUGGAUAUGAAUCGGUUCAAAGAUGCCAGUCUUCCUGUCAGCCGUUGAGCUCCCUUCUUUGUACUUGGCGGCUCCAUCCGAAGAAUAGCUUCGAUUUUAUUCGGAUUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ061438.1	ncRNA:22   CUUGGCUAAGUAUAGGUCUAGU   1   *||=*||||||||||||||||| targets:37   CAAUAGAUUCAUAUCCAGAUCA   58 Target Full Sequence	2.0	TSA: Zea mays contig62560, mRNA sequence	NA	coding protein	psRNATarget
AF049112.1	ncRNA:22   CUUGGCUAAGUAUAGGUCUAGU   1   *|||*||||=|||||||||||| targets:522   CAACAGAUUUAUAUCCAGAUCA   543 Target Full Sequence	2.5	Zea mays retrotransposon Cinful prpol mRNA, partial cds	NA	coding protein	psRNATarget
NM_001138713.1	ncRNA:22   CU-UGGCUAAGUAUAGGUCUAGU   1   ||-|||||||||*|||||||||* targets:378   GAGACCGAUUCAAAUCCAGAUCC   400 Target Full Sequence	2.5	Zea mays uncharacterized LOC100193612 (IDP1971), mRNA	NA	coding protein	psRNATarget
BT035925.1	ncRNA:22   CU-UGGCUAAGUAUAGGUCUAGU   1   ||-|||||||||*|||||||||* targets:378   GAGACCGAUUCAAAUCCAGAUCC   400 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0088G03 mRNA, complete cds	NA	coding protein	psRNATarget