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BaseInfo

ncRNA ID novel_zma_miR1071
Species Zea mays
Class miRNA
Genome position Chr4:38574294-38574339 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089699;SRR2089702;SRR2089703;SRR2089706;SRR2089708
Length 22
Mature sequence(if miRNA) 25 - ACAGGAUAUUGGGUAUUUCUUU - 46
Stem-loop(if miRNA) --                    U
  AGAAAUAUCCAAUAUCUUGU U
  ||||||||||||||||||||
  UCUUUAUGGGUUAUAGGACA C
UU                    A
Stem-loop sequence AGAAAUAUCCAAUAUCUUGUUUCAACAGGAUAUUGGGUAUUUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI405968.1
ncRNA:22   UUUCUUUAUGGGUUAUAGGACA   1
  ||||||||||||||||||||||
targets:10   AAAGAAAUACCCAAUAUCCUGU   31

0.0 Sequence 4093 from Patent EP2074227 NA coding protein psRNATarget
JB166429.1
ncRNA:22   UUUCUUUAUGGGUUAUAGGACA   1
  ||||||||||||||||||||||
targets:10   AAAGAAAUACCCAAUAUCCUGU   31

0.0 Sequence 4093 from Patent EP2559767 NA coding protein psRNATarget
LQ238098.1
ncRNA:22   UUUCUUUAUGGGUUAUAGGACA   1
  ||||||||||||||||||||||
targets:10   AAAGAAAUACCCAAUAUCCUGU   31

0.0 Sequence 4093 from Patent EP2985353 NA coding protein psRNATarget